Emergence of sparse coding, balance and decorrelation from a biologically-grounded spiking neural network model of learning in the primary visual cortex.

Hamish Meffin https://scholar.google.com/citations?user=fA1TLW0AAAAJ https://zbmath.org/authors/?q=ai:meffin.hamish https://mathscinet.ams.org/mathscinet/MRAuthorID/889780 https://mathgenealogy.org/id.php?id=64367 https://orcid.org/0000-0003-4307-6841 https://www.wikidata.org/entity/Q41045088 https://ieeexplore.ieee.org/author/37392864300

Marko A. Ruslim Martin J. Spencer Hinze Hogendoorn Hamish Meffin Yanbo Lian Anthony N. Burkitt Emergence of sparse coding, balance and decorrelation from a biologically-grounded spiking neural network model of learning in the primary visual cortex. 1013644 2025 21 PLoS Comput. Biol. 11 https://doi.org/10.1371/journal.pcbi.1013644 db/journals/ploscb/ploscb21.html#RuslimSHMLB25 streams/journals/ploscb

Yanbo Lian Ali Almasi David B. Grayden Tatiana Kameneva Anthony N. Burkitt Hamish Meffin Learning receptive field properties of complex cells in V1. 2021 17 PLoS Comput. Biol. 3 https://doi.org/10.1371/journal.pcbi.1007957 db/journals/ploscb/ploscb17.html#LianAGKBM21

Martin J. Spencer Hamish Meffin Anthony N. Burkitt David B. Grayden Compensation for Traveling Wave Delay Through Selection of Dendritic Delays Using Spike-Timing-Dependent Plasticity in a Model of the Auditory Brainstem. 2018 12 Frontiers Comput. Neurosci. https://doi.org/10.3389/fncom.2018.00036 https://www.wikidata.org/entity/Q55242879 db/journals/ficn/ficn12.html#SpencerMBG18 36

Matias I. Maturana Nicholas V. Apollo David J. Garrett Tatiana Kameneva Shaun L. Cloherty David B. Grayden Anthony N. Burkitt Michael R. Ibbotson Hamish Meffin Electrical receptive fields of retinal ganglion cells: Influence of presynaptic neurons. 2018 14 PLoS Comput. Biol. 2 https://doi.org/10.1371/journal.pcbi.1005997 https://www.wikidata.org/entity/Q50047288 db/journals/ploscb/ploscb14.html#MaturanaAGKCGBI18

Kevin Mengl Hamish Meffin Michael R. Ibbotson Tatiana Kameneva Neuroprostheses: method to evaluate the information content of stimulation strategies. 4724-4727 2018 EMBC https://doi.org/10.1109/EMBC.2018.8513122 https://www.wikidata.org/entity/Q93150625 conf/embc/2018 db/conf/embc/embc2018.html#MenglMIK18 Tatiana Kameneva Hamish Meffin Anthony N. Burkitt David B. Grayden Bistability in Hodgkin-Huxley-type equations. 4728-4731 2018 EMBC https://doi.org/10.1109/EMBC.2018.8513233 https://www.wikidata.org/entity/Q93150628 conf/embc/2018 db/conf/embc/embc2018.html#KamenevaMBG18

Matias I. Maturana Nicholas V. Apollo Alex E. Hadjinicolaou David J. Garrett Shaun L. Cloherty Tatiana Kameneva David B. Grayden Michael R. Ibbotson Hamish Meffin A Simple and Accurate Model to Predict Responses to Multi-electrode Stimulation in the Retina. 2016 12 PLoS Comput. Biol. 4 https://doi.org/10.1371/journal.pcbi.1004849 https://www.wikidata.org/entity/Q35976290 db/journals/ploscb/ploscb12.html#MaturanaAHGCKGI16

Timothy Esler Anthony N. Burkitt David B. Grayden Robert R. Kerr Bahman Tahayori Hamish Meffin A computational model of orientation-dependent activation of retinal ganglion cells. 5447-5450 2016 EMBC https://doi.org/10.1109/EMBC.2016.7591959 https://www.wikidata.org/entity/Q50857156 conf/embc/2016 db/conf/embc/embc2016.html#EslerBGKTM16

Tatiana Kameneva Miganoosh Abramian Daniele Zarelli Dragan Nesic Anthony N. Burkitt Hamish Meffin David B. Grayden Spike history neural response model. 463-481 2015 38 J. Comput. Neurosci. 3 https://doi.org/10.1007/s10827-015-0549-5 https://www.wikidata.org/entity/Q41089745 db/journals/jcns/jcns38.html#KamenevaAZNBMG15

Matias I. Maturana Nicholas V. Apollo David J. Garrett Tatiana Kameneva Hamish Meffin Michael R. Ibbotson Shaun L. Cloherty David B. Grayden The effects of temperature changes on retinal ganglion cell responses to electrical stimulation. 7506-7509 2015 EMBC https://doi.org/10.1109/EMBC.2015.7320128 https://www.wikidata.org/entity/Q53221821 conf/embc/2015 db/conf/embc/embc2015.html#MaturanaAGKMICG15

Tatiana Kameneva Daniele Zarelli Dragan Nesic David B. Grayden Anthony N. Burkitt Hamish Meffin A comparison of open-loop and closed-loop stimulation strategies to control excitation of retinal ganglion cells. 164-174 2014 14 Biomed. Signal Process. Control. https://doi.org/10.1016/j.bspc.2014.07.015 db/journals/bspc/bspc14.html#KamenevaZNGBM14

Matias I. Maturana Tatiana Kameneva Anthony N. Burkitt Hamish Meffin David B. Grayden The effect of morphology upon electrophysiological responses of retinal ganglion cells: simulation results. 157-175 2014 36 J. Comput. Neurosci. 2 https://doi.org/10.1007/s10827-013-0463-7 https://www.wikidata.org/entity/Q38256515 db/journals/jcns/jcns36.html#MaturanaKBMG14

Nhan Tran Shun Bai Jiawei Yang Hosung Chun Omid Kavehei Yuanyuan Yang Vijay Muktamath David C. Ng Hamish Meffin Mark E. Halpern Efstratios Skafidas A Complete 256-Electrode Retinal Prosthesis Chip. 751-765 2014 49 IEEE J. Solid State Circuits 3 https://doi.org/10.1109/JSSC.2014.2298037 db/journals/jssc/jssc49.html#TranBYCKYMNMHS14

Tatiana Kameneva David B. Grayden Hamish Meffin Anthony N. Burkitt Feedback stimulation strategy: Control of retinal ganglion cells activation. 1703-1706 2014 EMBC https://doi.org/10.1109/EMBC.2014.6943935 https://www.wikidata.org/entity/Q51019400 conf/embc/2014 db/conf/embc/embc2014.html#KamenevaGMB14 Omid Monfared Dragan Nesic Dean R. Freestone David B. Grayden Bahman Tahayori Hamish Meffin Electrical stimulation of neural tissue modeled as a cellular composite: Point Source electrode in an isotropic tissue. 4856-4859 2014 EMBC https://doi.org/10.1109/EMBC.2014.6944711 https://www.wikidata.org/entity/Q86496045 conf/embc/2014 db/conf/embc/embc2014.html#MonfaredNFGTM14 Matias I. Maturana David B. Grayden Anthony N. Burkitt Hamish Meffin Tatiana Kameneva Multicompartment retinal ganglion cells response to high frequency bi-phasic pulse train stimulation: Simulation results. 69-72 2013 EMBC https://doi.org/10.1109/EMBC.2013.6609439 https://www.wikidata.org/entity/Q48947804 conf/embc/2013 db/conf/embc/embc2013.html#MaturanaGBMK13 Matias I. Maturana Raymond C. S. Wong Shaun L. Cloherty Michael R. Ibbotson Alex E. Hadjinicolaou David B. Grayden Anthony N. Burkitt Hamish Meffin Brendan J. O'Brien Tatiana Kameneva Retinal ganglion cells electrophysiology: The effect of cell morphology on impulse waveform. 2583-2586 2013 EMBC https://doi.org/10.1109/EMBC.2013.6610068 https://www.wikidata.org/entity/Q43771653 conf/embc/2013 db/conf/embc/embc2013.html#MaturanaWCIHGBM13 Hamish Meffin Bahman Tahayori David B. Grayden Anthony N. Burkitt Internal inconsistencies in models of electrical stimulation in neural tissue. 5946-5949 2013 EMBC https://doi.org/10.1109/EMBC.2013.6610906 https://www.wikidata.org/entity/Q48944996 conf/embc/2013 db/conf/embc/embc2013.html#MeffinTGB13 Nicholas V. Apollo David B. Grayden Anthony N. Burkitt Hamish Meffin Tatiana Kameneva Modeling intrinsic electrophysiology of AII amacrine cells: Preliminary results. 6551-6554 2013 EMBC https://doi.org/10.1109/EMBC.2013.6611056 https://www.wikidata.org/entity/Q46358659 conf/embc/2013 db/conf/embc/embc2013.html#ApolloGBMK13 Hamish Meffin What limits spatial perception with retinal implants? 1545-1549 2013 ICIP https://doi.org/10.1109/ICIP.2013.6738318 conf/icip/2013 db/conf/icip/icip2013.html#Meffin13

Martin J. Spencer David B. Grayden Ian C. Bruce Hamish Meffin Anthony N. Burkitt An investigation of dendritic delay in octopus cells of the mammalian cochlear nucleus. 2012 6 Frontiers Comput. Neurosci. https://doi.org/10.3389/fncom.2012.00083 https://www.wikidata.org/entity/Q30461364 db/journals/ficn/ficn6.html#SpencerGBMB12 83

Nicholas L. Opie Anthony N. Burkitt Hamish Meffin David B. Grayden Heating of the Eye by a Retinal Prosthesis: Modeling, Cadaver and In Vivo Study. 339-345 2012 59 IEEE Trans. Biomed. Eng. 2 https://doi.org/10.1109/TBME.2011.2171961 https://www.wikidata.org/entity/Q82088571 db/journals/tbe/tbe59.html#OpieBMG12

Alexey S. Moroz Mark D. McDonnell Anthony N. Burkitt David B. Grayden Hamish Meffin Information theoretic inference of the optimal number of electrodes for future cochlear implants using a spiral cochlea model. 2965-2968 2012 EMBC https://doi.org/10.1109/EMBC.2012.6346586 https://www.wikidata.org/entity/Q39475709 conf/embc/2012 db/conf/embc/embc2012.html#MorozMBGM12 Shaun L. Cloherty Raymond C. S. Wong Alex E. Hadjinicolaou Hamish Meffin Michael R. Ibbotson Brendan J. O'Brien Epiretinal electrical stimulation and the inner limiting membrane in rat retina. 2989-2992 2012 EMBC https://doi.org/10.1109/EMBC.2012.6346592 https://www.wikidata.org/entity/Q86022404 conf/embc/2012 db/conf/embc/embc2012.html#ClohertyWHMIO12 Nicholas A. Venables Bahman Tahayori Hamish Meffin David B. Grayden Anthony N. Burkitt Determining the electrical impedance of the retina from a complex voltage map. 3005-3008 2012 EMBC https://doi.org/10.1109/EMBC.2012.6346596 https://www.wikidata.org/entity/Q86022420 conf/embc/2012 db/conf/embc/embc2012.html#VenablesTMGB12 Craig O. Savage Tatiana Kameneva David B. Grayden Hamish Meffin Anthony N. Burkitt Minimisation of required charge for desired neuronal spike rate. 3009-3012 2012 EMBC https://doi.org/10.1109/EMBC.2012.6346597 https://www.wikidata.org/entity/Q51271039 conf/embc/2012 db/conf/embc/embc2012.html#SavageKGMB12

Hamish Meffin Tatiana Kameneva The electrotonic length constant: A theoretical estimate for neuroprosthetic electrical stimulation. 105-111 2011 6 Biomed. Signal Process. Control. 2 https://doi.org/10.1016/j.bspc.2010.09.005 db/journals/bspc/bspc6.html#MeffinK11

Tatiana Kameneva Hamish Meffin Anthony N. Burkitt Modelling intrinsic electrophysiological properties of ON and OFF retinal ganglion cells. 547-561 2011 31 J. Comput. Neurosci. 3 https://doi.org/10.1007/s10827-011-0322-3 https://www.wikidata.org/entity/Q51587119 db/journals/jcns/jcns31.html#KamenevaMB11

Sean Byrnes Anthony N. Burkitt David B. Grayden Hamish Meffin Learning a Sparse Code for Temporal Sequences Using STDP and Sequence Compression. 2567-2598 2011 23 Neural Comput. 10 https://doi.org/10.1162/NECO_a_00184 https://www.wikidata.org/entity/Q49084613 db/journals/neco/neco23.html#ByrnesBGM11

Craig O. Savage David B. Grayden Hamish Meffin Anthony N. Burkitt Predicting phosphene elicitation in patients with retinal implants: A mathematical study. 6246-6249 2011 EMBC https://doi.org/10.1109/IEMBS.2011.6091542 https://www.wikidata.org/entity/Q51444973 conf/embc/2011 db/conf/embc/embc2011.html#SavageGMB11 Bahman Tahayori Hamish Meffin Nicholas A. Venables David B. Grayden Anthony N. Burkitt Theoretical framework for estimating the conductivity map of the retina through finite element analysis. 6721-6724 2011 EMBC https://doi.org/10.1109/IEMBS.2011.6091657 https://www.wikidata.org/entity/Q45859799 conf/embc/2011 db/conf/embc/embc2011.html#TahayoriMVGB11 Tatiana Kameneva David B. Grayden Hamish Meffin Anthony N. Burkitt Simulating electrical stimulation of degenerative retinal ganglion cells with bi-phasic pulse trains. 7103-7106 2011 EMBC https://doi.org/10.1109/IEMBS.2011.6091795 https://www.wikidata.org/entity/Q51444064 conf/embc/2011 db/conf/embc/embc2011.html#KamenevaGMB11 David C. Ng Chris E. Williams Penny J. Allen Shun Bai Clive S. Boyd Hamish Meffin Mark E. Halpern Efstratios Skafidas Wireless power delivery for retinal prostheses. 8356-8360 2011 EMBC https://doi.org/10.1109/IEMBS.2011.6092061 https://www.wikidata.org/entity/Q83272192 conf/embc/2011 db/conf/embc/embc2011.html#NgWABBMHS11

Sean Byrnes Anthony N. Burkitt David B. Grayden Hamish Meffin Spiking Neuron Model for Temporal Sequence Recognition. 61-93 2010 22 Neural Comput. 1 https://doi.org/10.1162/neco.2009.12-07-679 https://www.wikidata.org/entity/Q48429224 db/journals/neco/neco22.html#ByrnesBGM10

Mark D. McDonnell Anthony N. Burkitt David B. Grayden Hamish Meffin Alex J. Grant A channel model for inferring the optimal number of electrodes for future cochlear implants. 928-940 2010 56 IEEE Trans. Inf. Theory 2 https://doi.org/10.1109/TIT.2009.2037054 https://www.wikidata.org/entity/Q115409166 db/journals/tit/tit56.html#McDonnellBGMG10

Hamish Meffin Anthony N. Burkitt David B. Grayden Dynamically adjustable contrast enhancement from cortical background activity. 633-639 2005 65-66 Neurocomputing https://doi.org/10.1016/j.neucom.2004.10.056 db/journals/ijon/ijon65.html#MeffinBG05

Hamish Meffin Anthony N. Burkitt David B. Grayden An Analytical Model for the 'Large, Fluctuating Synaptic Conductance State' Typical of Neocortical Neurons <i>In Vivo</i>. 159-175 2004 16 J. Comput. Neurosci. 2 https://doi.org/10.1023/B:JCNS.0000014108.03012.81 https://www.wikidata.org/entity/Q47222238 db/journals/jcns/jcns16.html#MeffinBG04

Anthony N. Burkitt Hamish Meffin David B. Grayden Spike-Timing-Dependent Plasticity: The Relationship to Rate-Based Learning for Models with Weight Dynamics Determined by a Stable Fixed Point. 885-94 2004 16 Neural Comput. 5 https://doi.org/10.1162/089976604773135041 https://www.wikidata.org/entity/Q47423448 db/journals/neco/neco16.html#BurkittMG04

Anthony N. Burkitt Hamish Meffin David B. Grayden Study of neuronal gain in a conductance-based leaky integrate-and-fire neuron model with balanced excitatory and inhibitory synaptic input. 119-125 2003 89 Biol. Cybern. 2 https://doi.org/10.1007/s00422-003-0408-8 https://www.wikidata.org/entity/Q47876483 db/journals/bc/bc89.html#BurkittMG03

Anthony N. Burkitt Hamish Meffin David B. Grayden Gain modulation and balanced synaptic input in a conductance-based neural model. 221-226 2003 52-54 Neurocomputing https://doi.org/10.1016/S0925-2312(02)00742-7 db/journals/ijon/ijon52.html#BurkittMG03

Miganoosh Abramian Penny J. Allen Ali Almasi Nicholas V. Apollo Shun Bai Clive S. Boyd Ian C. Bruce Anthony N. Burkitt Sean Byrnes Hosung Chun Shaun L. Cloherty Timothy Esler Dean R. Freestone David J. Garrett Alex J. Grant David B. Grayden Alex E. Hadjinicolaou Mark E. Halpern Hinze Hogendoorn Michael R. Ibbotson Tatiana Kameneva Omid Kavehei Robert R. Kerr Yanbo Lian Matias I. Maturana Mark D. McDonnell Kevin Mengl Omid Monfared Alexey S. Moroz Vijay Muktamath Dragan Nesic David C. Ng Brendan J. O'Brien Nicholas L. Opie Marko A. Ruslim Craig O. Savage Efstratios Skafidas Martin J. Spencer Bahman Tahayori Nhan Tran Nicholas A. Venables Chris E. Williams Raymond C. S. Wong Jiawei Yang Yuanyuan Yang Daniele Zarelli