The Pandata Scalable Open-Source Analysis Stack.

James A. Bednar James A. Bednar Martin Durant The Pandata Scalable Open-Source Analysis Stack. 85-92 2023 SciPy https://doi.org/10.25080/gerudo-f2bc6f59-00b conf/scipy/2023 db/conf/scipy/scipy2023.html#BednarD23

Ziheng Sun Laura Sandoval Robert Crystal-Ornelas S. Mostafa Mousavi Jinbo Wang 0002 Cindy Lin Nicoleta Cristea Daniel Q. Tong Wendy Hawley Carande Xiaogang Ma 0001 Yuhan Rao James A. Bednar Amanda Tan Jianwu Wang 0001 Sanjay Purushotham Thomas E. Gill Julien Chastang Daniel Howard 0003 Benjamin Holt Chandana Gangodagamage Peisheng Zhao Zachary Chester Javier Orduz Aji John A review of Earth Artificial Intelligence. 105034 2022 159 Comput. Geosci. https://doi.org/10.1016/j.cageo.2022.105034 db/journals/gandc/gandc159.html#SunSCMWLCTCMRBT22

Sophia Yang Marc Skov Madsen James A. Bednar HoloViz: Visualization and Interactive Dashboards in Python. 4846-4847 2022 KDD https://doi.org/10.1145/3534678.3542621 conf/kdd/2022 db/conf/kdd/kdd2022.html#YangMB22 Dharhas Pothina Philipp J. F. Rudiger James A. Bednar Scott D. Christensen Kevin Winters Kimberly Pevey Christopher E. Ball Gregory Brener EarthSim: Flexible Environmental Simulation Workflows Entirely Within Jupyter Notebooks. 48-55 2018 SciPy https://doi.org/10.25080/Majora-4af1f417-007 conf/scipy/2018 db/conf/scipy/scipy2018.html#PothinaRBCWPBB18

Ján Antolík Sonja B. Hofer James A. Bednar Thomas D. Mrsic-Flogel Model Constrained by Visual Hierarchy Improves Prediction of Neural Responses to Natural Scenes. 2016 12 PLoS Comput. Biol. 6 https://doi.org/10.1371/journal.pcbi.1004927 https://www.wikidata.org/entity/Q36062441 db/journals/ploscb/ploscb12.html#AntolikHBM16

Eilif B. Müller James A. Bednar Markus Diesmann Marc-Oliver Gewaltig Michael L. Hines Andrew P. Davison Python in neuroscience. 2015 9 Frontiers Neuroinformatics https://doi.org/10.3389/fninf.2015.00011 https://www.wikidata.org/entity/Q35404725 db/journals/fini/fini9.html#MullerBDGHD15 11

Laurent U. Perrinet James A. Bednar Sparse coding of natural images using a prior on edge co-occurences. 2231-2235 2015 EUSIPCO https://doi.org/10.1109/EUSIPCO.2015.7362781 https://www.wikidata.org/entity/Q57988111 conf/eusipco/2015 db/conf/eusipco/eusipco2015.html#PerrinetB15 Jean-Luc Richard Stevens Philipp J. F. Rudiger James A. Bednar HoloViews: Building Complex Visualizations Easily for Reproducible Science. 59-66 2015 SciPy https://doi.org/10.25080/Majora-7b98e3ed-00a conf/scipy/2015 db/conf/scipy/scipy2015.html#StevensRB15 James A. Bednar Constructing Complex Systems Via Activity-Driven Unsupervised Hebbian Self-Organization. 201-225 2014 Growing Adaptive Machines https://doi.org/10.1007/978-3-642-55337-0_7 series/sci/2014-557 db/series/sci/sci557.html#Bednar14 James A. Bednar Topographica. 2014 Encyclopedia of Computational Neuroscience https://doi.org/10.1007/978-1-4614-7320-6_263-5 reference/cn/2014 db/reference/cn/cn2014.html#Bednar14 James A. Bednar Visual Aftereffects, Models of. 2014 Encyclopedia of Computational Neuroscience https://doi.org/10.1007/978-1-4614-7320-6_730-1 reference/cn/2014 db/reference/cn/cn2014.html#Bednar14a

Jean-Luc Richard Stevens Marco Elver James A. Bednar An automated and reproducible workflow for running and analyzing neural simulations using Lancet and IPython Notebook. 2013 7 Frontiers Neuroinformatics https://doi.org/10.3389/fninf.2013.00044 https://www.wikidata.org/entity/Q38451087 db/journals/fini/fini7.html#StevensEB13 44

James A. Bednar Visual Cortex as a General-Purpose Information-Processing Device. 480-485 2012 ECCV Workshops (1) https://doi.org/10.1007/978-3-642-33863-2_49 conf/eccv/2012w1 db/conf/eccv/eccv2012w1.html#Bednar12

Ján Antolík James A. Bednar Development of Maps of Simple and Complex Cells in the Primary Visual Cortex. 2011 5 Frontiers Comput. Neurosci. https://doi.org/10.3389/fncom.2011.00017 https://www.wikidata.org/entity/Q41778268 db/journals/ficn/ficn5.html#AntolikB11 17

Stuart P. Wilson James A. Bednar Tony J. Prescott Benjamin Mitchinson Neural Computation via Neural Geometry: A Place Code for Inter-whisker Timing in the Barrel Cortex? 2011 7 PLoS Comput. Biol. 10 https://doi.org/10.1371/journal.pcbi.1002188 https://www.wikidata.org/entity/Q34055212 db/journals/ploscb/ploscb7.html#WilsonBPM11

James A. Bednar Topographica: building and analyzing map-level simulations from Python, C/C++, MATLAB, NEST, or NEURON components. 2009 3 Frontiers Neuroinformatics https://doi.org/10.3389/neuro.11.008.2009 https://www.wikidata.org/entity/Q37151906 db/journals/fini/fini3.html#Bednar09 8

Vinod K. Valsalam James A. Bednar Risto Miikkulainen Developing Complex Systems Using Evolved Pattern Generators. 181-198 2007 11 IEEE Trans. Evol. Comput. 2 https://doi.org/10.1109/TEVC.2006.890272 db/journals/tec/tec11.html#ValsalamBM07

James A. Bednar Risto Miikkulainen Joint maps for orientation, eye, and direction preference in a self-organizing model of V1. 1272-1276 2006 69 Neurocomputing 10-12 https://doi.org/10.1016/j.neucom.2005.12.090 db/journals/ijon/ijon69.html#BednarM06

Stefanie Jegelka James A. Bednar Risto Miikkulainen Prenatal development of ocular dominance and orientation maps in a self-organizing model of V1. 1291-1296 2006 69 Neurocomputing 10-12 https://doi.org/10.1016/j.neucom.2005.12.094 db/journals/ijon/ijon69.html#JegelkaBM06

Risto Miikkulainen James A. Bednar Yoonsuck Choe Joseph Sirosh Computational Maps in the Visual Cortex. I-XXIX, 1-538 Springer 2005 978-0-387-22024-6 https://doi.org/10.1007/0-387-28806-6

James A. Bednar Judah B. De Paula Risto Miikkulainen Self-organization of color opponent receptive fields and laterally connected orientation maps. 69-76 2005 65-66 Neurocomputing https://doi.org/10.1016/j.neucom.2004.10.055 db/journals/ijon/ijon65.html#BednarPM05

Vinod K. Valsalam James A. Bednar Risto Miikkulainen Constructing good learners using evolved pattern generators. 11-18 2005 conf/gecco/2005 GECCO https://doi.org/10.1145/1068009.1068012 db/conf/gecco/gecco2005.html#ValsalamBM05

James A. Bednar Risto Miikkulainen Prenatal and postnatal development of laterally connected orientation maps. 985-992 2004 58-60 Neurocomputing https://doi.org/10.1016/j.neucom.2004.01.156 db/journals/ijon/ijon58.html#BednarM04

James A. Bednar Yoonsuck Choe Judah B. De Paula Risto Miikkulainen Jefferson Provost Tal Tversky Modeling cortical maps with Topographica. 1129-1135 2004 58-60 Neurocomputing https://doi.org/10.1016/j.neucom.2004.01.177 db/journals/ijon/ijon58.html#BednarCPMPT04

James A. Bednar Amol Kelkar Risto Miikkulainen Scaling self-organizing maps to model large cortical networks. 275-301 2004 2 Neuroinformatics 3 https://doi.org/10.1385/NI:2:3:275 https://www.wikidata.org/entity/Q80558571 db/journals/ni/ni2.html#BednarKM04

James A. Bednar Risto Miikkulainen Self-organization of spatiotemporal receptive fields and laterally connected direction and orientation maps. 473-480 2003 52-54 Neurocomputing https://doi.org/10.1016/S0925-2312(02)00735-X db/journals/ijon/ijon52.html#BednarM03

James A. Bednar Risto Miikkulainen Learning Innate Face Preferences. 1525-1557 2003 15 Neural Comput. 7 https://doi.org/10.1162/089976603321891792 https://www.wikidata.org/entity/Q47817758 db/journals/neco/neco15.html#BednarM03

James A. Bednar Amol Kelkar Risto Miikkulainen Modeling large cortical networks with growing self-organizing maps. 315-321 2002 44-46 Neurocomputing https://doi.org/10.1016/S0925-2312(02)00358-2 db/journals/ijon/ijon44.html#BednarKM02

James A. Bednar Risto Miikkulainen Tilt Aftereffects in a Self-Organizing Model of the Primary Visual Cortex. 1721-1740 2000 12 Neural Comput. 7 db/journals/neco/neco12.html#BednarM00 https://doi.org/10.1162/089976600300015321 https://www.wikidata.org/entity/Q52108260

James A. Bednar Risto Miikkulainen Self-Organization of Innate Face Preferences: Could Genetics Be Expressed through Learning? 117-122 2000 conf/aaai/2000 AAAI/IAAI db/conf/aaai/aaai2000.html#BednarM00 http://www.aaai.org/Library/AAAI/2000/aaai00-018.php Risto Miikkulainen James A. Bednar Yoonsuck Choe Joseph Sirosh A Self-Organizing Neural Network Model of the Primary Visual Cortex. 815-818 1998 conf/iconip/1998 ICONIP db/conf/iconip/iconip1998.html#MiikkulainenBCS98 Ján Antolík Christopher E. Ball Gregory Brener Wendy Hawley Carande Julien Chastang Zachary Chester Yoonsuck Choe Scott D. Christensen Nicoleta Cristea Robert Crystal-Ornelas Andrew P. Davison Markus Diesmann Martin Durant Marco Elver Chandana Gangodagamage Marc-Oliver Gewaltig Thomas E. Gill Michael L. Hines Sonja B. Hofer Benjamin Holt Daniel Howard 0003 Stefanie Jegelka Aji John Amol Kelkar Cindy Kaiying LinCindy Lin Xiaogang Ma 0001 Marc Skov Madsen Risto Miikkulainen Benjamin Mitchinson S. Mostafa Mousavi Thomas D. Mrsic-Flogel Eilif B. MullerEilif B. Müller Javier Orduz Judah B. De Paula Laurent U. Perrinet Kimberly Pevey Dharhas Pothina Tony J. Prescott Jefferson Provost Sanjay Purushotham Yuhan Rao Philipp J. F. Rudiger Laura Sandoval Joseph Sirosh Jean-Luc Richard Stevens Ziheng Sun Amanda Tan Daniel Q. Tong Tal Tversky Vinod K. Valsalam Jianwu Wang 0001 Jinbo Wang 0002 Stuart P. Wilson Kevin Winters Sophia Yang Peisheng Zhao