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Review
. 2012 Jun 12;1(1):1-13.
doi: 10.3390/antibiotics1010001.

Classification Framework and Chemical Biology of Tetracycline-Structure-Based Drugs

Affiliations
Review

Classification Framework and Chemical Biology of Tetracycline-Structure-Based Drugs

Domenico Fuoco. Antibiotics (Basel). .

Abstract

By studying the literature about tetracyclines (TCs), it becomes clearly evident that TCs are very dynamic molecules. In some cases, their structure-activity-relationship (SAR) are well known, especially against bacteria, while against other targets, they are virtually unknown. In other diverse fields of research-such as neurology, oncology and virology-the utility and activity of the tetracyclines are being discovered and are also emerging as new technological fronts. The first aim of this paper is to classify the compounds already used in therapy and prepare the schematic structure that includes the next generation of TCs. The second aim of this work is to introduce a new framework for the classification of old and new TCs, using a medicinal chemistry approach to the structure of those drugs. A fully documented Structure-Activity-Relationship (SAR) is presented with the analysis data of antibacterial and nonantibacterial (antifungal, antiviral and anticancer) tetracyclines. The lipophilicity and the conformational interchangeability of the functional groups are employed to develop the rules for TC biological activity.

Keywords: CMT; aminomethylcycline; anthracycline; antibiotics; fuorocycline; non-antibiotics; pentacycline; tetracycline.

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Figures

Figure 1
Figure 1
Structure-Activity-Relationship (SAR) of Tetracyclines (TCs). Shaded: Contact region with 30S rRNA. In blue polygonal: same anthracycline region.
Scheme 1
Scheme 1
Wide-spectrum of tetracycline activities as antibiotic drugs. TCs are subdivided in: Antibacterial (with typical and atypical mechanism of action), antifungal and antineoplastic.
Scheme 2
Scheme 2
Structure Activity Relationship of Tetracycline family drugs. Since their introduction in therapy, into the early 1950s, tetracyclines have constantly been modified according to the capabilities of the pharmaceutical laboratories in a given time. Starting as antibacterials, tetracyclines have demonstrated antifungal, antiviral and antitumor properties as well. Nowadays, the new tetracyclines are the most powerful drugs for serious skin infection and the future prospective goal is to separate their anti-inflammatory properties form the antibiotic properties.
Figure 2
Figure 2
3D geometrical shape of Tetracycline (A), Tigelcycline (B) and SF2575 (C). TCs show different conformation and biological activities due their functional groups on the same rigid molecular skeleton.

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