Soil fauna and soil function in the fabric of the food web
2007, Pedobiologia
https://doi.org/10.1016/J.PEDOBI.2006.10.007Abstract
AI
AI
This article investigates the complex interrelationships between soil fauna and soil functions, emphasizing the role of plants as ecosystem engineers. It challenges the conventional perspective by illustrating how both soil biota and vegetation are crucial to the terrestrial food web, affecting processes such as primary production and decomposition. Additionally, it highlights the importance of root systems and the rhizosphere in modifying biotic interactions and nutrient cycling within the soil.
References (97)
- Albrecht, A., Cadisch, G., Blanchart, E., Sitompul, S.M., Vanlauwe, B., 2004. Below-ground inputs: relation- ships with soil quality, soil C storage and soil structure. In: van Noordwijk, M., Cadisch, G., Ong, C.K. (Eds.), Below-Ground Interactions in Tropical Agroecosys- tems: Concepts and Models with Multiple Plant Components. CABI, Wallingford, pp. 193-207.
- Anderson, J.M., 1988. Invertebrate-mediated transport processes in soils. Agric. Ecosyst. Environ. 24, 5-19.
- Anderson, J.M., 2000. Food web functioning and ecosys- tem processes: problems and perceptions of scaling. In: Coleman, D.C., Hendrix, P.F. (Eds.), Invertebrates as Webmasters in Ecosystems. CABI, Wallingford, UK, pp. 3-24.
- Andre ´n, O., Brussaard, L., Clarholm, M., 1999. Soil organism influence on ecosystem-level processes: bypassing the ecological hierarchy? Appl. Soil. Ecol. 11, 177-188.
- Bardgett, R.D., Anderson, J.M., Behan-Pelletier, V., Brussaard, L., Coleman, D.C., Ettema, C., Moldenke, A., Schimel, J.P., Wall, D.H., 2001. The influence of soil biodiversity on hydrological pathways and the transfer of materials between terrestrial and aquatic ecosystems. Ecosystems 4, 421-429.
- Barthes, B., Roose, E., 2002. Aggregate stability as an indicator of soil susceptibility to runoff and erosion; validation at several levels. Catena 47, 133-149.
- Beare, M.H., Coleman, D.C., Crossley, D.A., Hendrix, P.F., Odum, E.P., 1995. A hierarchical approach to evaluat- ing the significance of soil biodiversity to biogeochem- ical cycling. Plant Soil 170, 5-22.
- Bignell, D.E., Holt, J.A., 2002. Termites. In: Lal, R. (Ed.), Encyclopedia of Soil Science. Marcel Dekker, New York, pp. 1305-1307.
- Blanchart, E., Albrecht, A., Alegre, J., Duboisset, A., Gilot, C., Pashanasi, B., Lavelle, P., Brussaard, L., 1999. Effects of earthworms on soil structure and physical properties. In: Lavelle, P., Brussaard, L., Hendrix, P. (Eds.), Earthworm Management in Tropical Agroecosystems. CABI, Wallingford, pp. 149-172.
- Bossuyt, H., Six, J., Hendrix, P.F., 2004. Rapid incorpora- tion of carbon from fresh residues into newly formed stable microaggregates within earthworm casts. Eur. J. Soil Sci. 55, 393-399.
- Bossuyt, H., Six, J., Hendrix, P.F., 2005. Protection of soil carbon by microaggregates within earthworm casts. Soil Biol. Biochem. 37, 251-258.
- Brown, G.G., Edwards, C.A., Brussaard, L., 2004. How eartworms affect plant growth: burrowing into the mechanisms. In: Edwards, C.A. (Ed.), Earthworm Ecology, second ed. CRC Press, Boca Raton, pp. 13-49.
- Brussaard, L., 1998. Soil fauna, guilds, functional groups and ecosystem processes. Appl. Soil Ecol. 9, 123-135.
- Brussaard, L., Juma, N.G., 1996. Organisms and humus in soils. In: Piccolo, A. (Ed.), Humic Substances in Terrestrial Ecosystems. Elsevier, Amsterdam, pp. 329-359.
- Cadisch, G., de Willigen, P., Suprayogo, D., Mobbs, D.C., van Noordwijk, M., Rowe, E.C., 2004. Catching and competing for mobile nutrients in soils. In: van Noordwijk, M., Cadisch, G., Ong, C.K. (Eds.), Below- ground Interactions in Tropical Agroecosystems: Con- cepts and Models with Multiple Plant Components. CABI, Wallingford, pp. 171-191.
- Chevallier, T., Blanchart, E., Girardin, C., Mariotti, A., Albrecht, A., Feller, C., 2001. The role of biological activity (roots, earthworms) in medium-term C dy- namics in a Vertisol under Digitaria decumbens (Gramineae) pasture. Appl. Soil Ecol. 16, 11-21.
- Coleman, D.C., Reid, C.P.P., Cole, C.V., 1983. Biological strategies of nutrient cycling in soil systems. Adv. Ecol. Res. 13, 1-55.
- Coleman, D.C., Odum, E.P., Crossley, D.A., 1992. Soil biology, soil ecology, and global change. Biol. Fert. Soils 14, 104-111.
- Crutzen, P.J., 2002. Geology of mankind. Nature 415, 23.
- Davies, R.G., Eggleton, P., Jones, D.T., Gathorne Hardy, F.J., Herna ´ndez, L.M., 2003. Evolution of termite functional diversity: analysis and synthesis of local ecological and regional influences on local species richness. J. Biogeogr. 30, 847-877.
- de Goede, R.G.M., 1996. Effects of sod-cutting on the nematode community of a secondary forest of Pinus sylvestris L. Biol. Fert. Soils 22, 227-236.
- de Ruiter, P.C., Neutel, A.M., Moore, J.C., 1995. Energetics, patterns of interaction strength, and stability in real ecosystems. Science 269, 1256-1260.
- de Ruiter, P.C., Moore, J.C., Zwart, K.B., Bouwman, L.A., Hassink, J., Bloem, J., de Vos, J.A., Marinissen, J.C.Y., Didden, W.A.M., Lebbink, G., Brussaard, L., 1993. Simulation of nitrogen mineralization in the below- ground food webs of two winter wheat fields. J. Appl. Ecol. 30, 95-106.
- Decae ¨ns, T., Rossi, J.P., 2001. Spatio-temporal structure of earthworm community and soil heterogeneity in a tropical pasture. Ecography 24, 671-682.
- Degens, B.P., 1997. Macro-aggregation of soils by biological bonding and binding mechanisms and the factors affecting these: a review. Aust. J. Soil Res. 35, 431-459.
- Denef, K., Six, J., Bossuyt, H., Frey, S.D., Elliott, E.T., Merckx, R., Paustian, K., 2001. Influence of dry-wet cycles on the interrelationships between aggregate, particulate organic matter, and microbial community dynamics. Soil Biol. Biochem. 33, 1599-1611.
- Didden, W.A.M., 1990. Involvement of Enchytraeidae (Oligochaeta) in soil structure evolution in agricultural fields. Biol. Fert. Soils 9, 152-158.
- Edwards, W.M., Shipitalo, M.J., Owens, L.B., Norton, L.D., 1990. Effect of Lumbricus terrestris L. burrows on hydrology of continuous no-till corn fields. Geo- derma 46, 73-84.
- Eggleton, P., Bignell, D.E., Hauser, S., Dibog, L., Norgrove, L., Birang, M.a., 2002. Termite diversity across an anthropogenic disturbance gradient in the humid forest zone of West Africa. Agric. Ecosyst. Environ. 90, 189-202.
- Elliott, E.T., 1986. Aggregate structure and carbon, nitrogen, and phosphorus in native and cultivated soils. Soil Sci. Soc. Am. J. 50, 627-633.
- Elliott, E.T., Coleman, D.C., 1988. Let the soil work for us. Ecol. Bull. 39, 23-32.
- Elliott, E.T., Anderson, R.V., Coleman, D.C., Cole, C.V., 1980. Habitable pore space and microbial trophic interactions. Oikos 35, 327-335.
- Ettema, C.H., Wardle, D.A., 2002. Spatial soil ecology. Trends Ecol. Evol. 17, 177-183.
- Gale, W.J., Cambardella, C.A., Bailey, T.B., 2000. Sur- face residue-and root-derived carbon in stable and unstable aggregates. Soil Sci. Soc. Am. J. 64, 196-201.
- Hassink, J., Bouwman, L.A., Zwart, K.B., Bloem, J., Brussaard, L., 1993. Relationships between soil tex- ture, physical protection of organic matter, soil biota, and C and N mineralization in grassland soils. Geoderma 57, 105-128.
- Heijnen, C.E., van Veen, J.A., 1991. A determination of protective microhabitats for bacteria introduced into soil. FEMS Microbiol. Ecol. 85, 73-80.
- Hiremath, A.J., Ewel, J.J., 2001. Ecosystem nutrient use efficiency, productivity, and nutrient accrual in model tropical communities. Ecosystems 4, 669-682.
- Hooper, D.U., Bignell, D.E., Brown, V.K., Brussaard, L., Dangerfield, J.M., Wall, D.H., Wardle, D.A., Coleman, D.C., Giller, K.E., Lavelle, P., van der Putten, W.H., de Ruiter, P.C., Rusek, J., Silver, W.L., Tiedje, J.M., Wolters, V., 2000. Interactions between aboveground and belowground biodiversity in terrestrial ecosys- tems: patterns, mechanisms, and feedbacks. BioScience 50, 1049-1061.
- Hunt, H.W., Coleman, D.C., Ingham, E.R., Ingham, R.E., Elliott, E.T., Moore, J.C., Rose, S.L., Reid, C.P.P., Morley, C.R., 1987. The detrital food web in a shortgrass prairie. Biol. Fert. Soils 3, 57-68.
- Jastrow, J.D., Boutton, T.W., Miller, R.M., 1996. Carbon dynamics of aggregate-associated organic matter estimated by carbon-13 natural abundance. Soil Sci. Soc. Am. J. 60, 801-807.
- Jenny, H., 1941. Factors of Soil Formation. McGraw-Hill, New York.
- Jones, C.G., Lawton, J.H., Schackak, M., 1994. Organ- isms as ecosystems engineers. Oikos 69, 373-386.
- Jones, D.T., Eggleton, P., 2000. Sampling termite assemblages in tropical forests: testing a rapid biodiversity assessment protocol. J. Appl. Ecol. 37, 191-203.
- Jongmans, A.G., Pulleman, M.M., Balabane, M., van Oort, F., Marinissen, J.C.Y., 2003. Soil structure and characteristics of organic matter in two orchards differing in earthworm activity. Appl. Soil Ecol. 24, 219-232.
- Juma, N.G., 1994. A conceptual framework to link carbon and nutrient cycling to soil structure formation. Agric. Ecosyst. Environ. 51, 257-267.
- Jungerius, P.D., van den Ancker, J.A.M., Muecher, H.J., 1999. The contribution of termites to the microgra- nular structure of soils on the Uasin Gishu Plateau, Kenya. Catena 34, 349-363.
- Kooyman, C., Onck, R.F.M., 1987. The Interaction Between Termite Activity, Agricultural Practices and Soil Characteristics in Kisii District. Wageningen Agicultural University Papers 87-3, Kenya, 120pp.
- Landeweert, R., Hoffland, E., Finlay, R.D., Kuyper, T.W., van Breemen, N., 2001. Linking plants to rocks: ectomycorrhizal fungi mobilize nutrients from miner- als. Trend Ecol. Evol. 16, 248-254.
- Lavelle, P., 2000. Ecological challenges for soil science. Soil Sci. 165, 73-86.
- Lavelle, P., 2002. Functional domains in soils. Ecol Res. 17, 441-450.
- Lavelle, P., Bignell, D.E., Lepage, M., Wolters, V., Roger, P., Ineson, P., Heal, O.W., Dhillion, S., 1997. Soil function in a changing world: the role of invertebrate ecosystem engineers. Eur. J. Soil Biol. 33, 159-193.
- Lavelle, P., Charpentier, F., Villenave, C., Rossi, J.P., Derouard, L., Pashanasi, B., Andre ´, J., Ponge, J.F., Bernier, N., 2004. Effects of earthworms on soil organic matter and nutrient dynamics at a landscape scale over decades. In: Edwards, C.A. (Ed.), Earth- worm Ecology. CRC Press, Boca Raton, pp. 145-160.
- Lavelle, P., Barois, I., Blanchart, E., Brown, G., Brus- saard, L., Decae ¨ns, T., Fragoso, C., Jimenez, M., ka Kajondo, K., de los A `ngeles Martı ´nez, M., Moreno, A., Pashanasi, B., Senapati, B., Villenave, C., 1998. Earthworms as a resource in tropical agroecosystems. Nat. Resour 34, 26-41.
- Le ´onard, J., Rajot, J.L., 2001. Influence of termites on runoff and infiltration: quantification and analysis. Geoderma 104, 17-40.
- Le ´onard, J., Perrier, E., Rajot, J.L., 2004. Biological macropores effect on runoff and infiltration: a combined experimental and modelling approach. Agric. Ecosyst. Environ. 104, 277-285.
- Lobry de Bruyn, L.A., Conacher, A.J., 1990. The role of termites and ants in soil modification: a review. Aust. J. Soil Res. 28, 55-93.
- Mando, A., 1997a. Effects of termites and mulch on the physical rehabilitation of structurally crusted soils in the Sahel. Land Degrad. Dev. 8, 269-278.
- Mando, A., 1997b. The impact of termites and mulch on the water balance of crusted Sahelian soil. Soil Technol. 11, 121-138.
- Mando, A., 1998. Soil-dwelling termites and mulches improve nutrient release and crop performance on Sahelian crusted soil. Arid. Soil Res. Rehab. 12, 153-164.
- Mando, A., Miedema, R., 1997. Termite-induced change in soil structure after mulching degraded (crusted) soil in the Sahel. Appl. Soil. Ecol. 6, 241-249.
- Mando, A., Stroosnijder, L., Brussaard, L., 1996. Effects of termites on infiltration into crusted soil. Geoderma 74, 107-113.
- Mando, A., Brussaard, L., Stroosnijder, L., 1999. Termite- and mulch-mediated rehabilitation of vegetation on crusted soil in West Africa. Restor. Ecol. 7, 33-41.
- Mando, A., Fatondji, D., Zougmore ´, R., Brussaard, L., Bielders, C., Martius, C., 2006. Restoring soil fertility in semi-arid West Africa: assessment of an indigenous technology. In: Uphoff, N., Ball, A.S., Fernandez, E., Herren, H., Husson, O., Laing, M., Palm, C., Pretty, J., Sanchez, P., Sanginga, N., Thies, J. (Eds.), Biological Approaches to Sustainable Soil Systems. CRC Press, Boca Raton, pp. 391-399.
- Mando, A., Ouattara, B., Se ´dogo, M., Stroosnijder, L., Ouattara, K., Brussaard, L., Vanlauwe, B., 2005a. Long-term effect of tillage and manure application on soil organic fractions and crop performance under Sudano-Sahelian conditions. Soil Till. Res. 80, 95-101.
- Mando, A., Somado, A.E., Wopereis, M.C.S., Breman, H., Ouattara, B., Stroosnijder, L., 2005b. Long-term effects of fallow, tillage and manure application on soil organic matter and nitrogen fractions and on sorghum yield under Sudano-Sahelian conditions. Soil Use Manage. 21, 25-31.
- Manlay, R.J., Kaire ´, M., Masse, D., Chotte, J.-L., Ciornei, G., Floret, C., 2002a. Carbon, nitrogen and phos- phorus allocation in agro-ecosystems of a West african savanna I. The plant component under semi-perma- nent cultivation. Agric. Ecosyst. Environ. 88, 215-232.
- Manlay, R.J., Masse, D., Chotte, J.-L., Feller, C., Kaire ´, M., Fardoux, J., Pontanier, R., 2002b. Carbon, nitro- gen and phosphorus allocation in agro-ecosystems of a West African savanna II. The soil component under semi-permanent cultivation. Agric. Ecosyst. Environ. 88, 233-248.
- Manlay, R.J., Chotte, J.-L., Masse, D., Laurent, J.-Y., Feller, C., 2002c. Carbon, nitrogen and phosphorus allocation in agro-ecosystems of a West African savanna III. Plant and soil components under contin- uous cultivation. Agric. Ecosyst. Environ. 88, 249-269.
- Marinissen, J.C.Y., de Ruiter, P.C., 1993. Contribution of earthworms to carbon and nitrogen cycling in agro- ecosystems. Agric. Ecosyst. Environ. 47, 59-74.
- Martin, J.K., Merckx, R., 1993. The partitioning of root- derived carbon within the rhizosphere of arable crops. In: Merckx, R., Mulongoy, K. (Eds.), Soil Organic Matter Dynamics and Sustainability of Tropical Agri- culture. Wiley, Chichester, pp. 101-107.
- Morris, C., 1992. Aacademic Press, San Diego, p. 2432. Nadkarni, N.M., Schaefer, D., Matelson, T.J., Solano, R., 2002. Comparison of arboreal and terrestrial soil characteristics in a lower montane forest, Monte- verde, Costa Rica. Pedobiologia 46, 24-33.
- Neutel, A.M., Heesterbeek, J.A.P., de Ruiter, P.C., 2002. Stability in real food webs: weak links in long loops. Science 296, 1120-1123.
- Oue ´draogo, E., Mando, A., Brussaard, L., 2006. Soil macrofauna affect crop nitrogen and water use efficiencies in semi-arid West Africa. Eur. J. Soil Biol. (in press; electronically published 28 July 2006).
- Parton, W.J., Schimel, D.S., Cole, C.V., Ojima, D.S., 1987. Analysis of factors controlling soil organic matter levels in Great Plains grasslands. Soil Sci. Soc. Am. J. 51, 1173-1179.
- Postma, J., van Veen, J.A., 1990. Habitable pore space and population dynamics of Rhizobium leguminosarum biovar trifolii introduced into soil. Microbial Ecol. 19, 149-161.
- Pulleman, M., Jongmans, A., Marinissen, J., Bouma, J., 2003. Effects of organic versus conventional arable farming on soil structure and organic matter dynamics in a marine loam in the Netherlands. Soil Use Manage. 19, 157-165.
- Pulleman, M.M., Six, J., van Breemen, N., Jongmans, A.G., 2005a. Soil organic matter distribution and microaggregate characteristics as affected by agricul- tural management and earthworm activity. Eur. J. Soil. Sci. 56, 453-467.
- Pulleman, M.M., Six, J., Uyl, A., Marinissen, J.C.Y., Jongmans, A.G., 2005b. Earthworms and management affect organic matter incorporation and microaggre- gate formation in agricultural soils. Appl. Soil Ecol. 29, 1-15.
- Rillig, M.C., Wright, S.F., Eviner, V.T., 2002. The role of arbuscular mycorrhizal fungi and glomalin in soil aggregation: comparing effects of five plant species. Plant Soil 238, 325-333.
- Shipitalo, M.J., Protz, R., 1989. Chemistry and micro- morphology of aggregation in earthworm casts. Geoderma 45, 357-374.
- Six, J., Elliott, E.T., Paustian, K., 1999. Aggregate and soil organic matter dynamics under conventional and no-tillage systems. Soil Sci. Soc. Am. J. 63, 1350-1358.
- Six, J., Elliott, E.T., Paustian, K., 2000. Soil macroag- gregate turnover and microaggregate formation: a mechanism for C sequestration under no-tillage agriculture. Soil Biol. Biochem. 32, 2099-2103.
- Six, J., Conant, R.T., Paul, E.A., Paustian, K., 2002. Stabilization mechanisms of soil organic matter: implications for C-saturation of soils. Plant Soil 241, 155-176.
- Six, J., Bossuyt, H., Degryze, S., Denef, K., 2004. A history of research on the link between (micro)ag- gregates, soil biota, and soil organic matter dynamics. Soil Till Res. 79, 7-31.
- Six, J., Guggenberger, G., Paustian, K., Haumaier, L., Elliott, E.T., Zech, W., 2001. Sources and composition of soil organic matter fractions between and within soil aggregates. Eur. J. Soil Sci. 52, 607-618.
- Smith, P., Andre ´n, O., Brussaard, L., Dangerfield, M., Ekschmitt, K., Lavelle, P., Tate, K., 1998. Soil biota and global change at the ecosystem level: describing soil biota in mathematical models. Global Change Biol. 4, 773-784.
- Tian, G., Brussaard, L., Kang, B.T., 1993. Biological effects of plant residues with contrasting chemical compositions under humid tropical conditions: effects on soil fauna. Soil Biol. Biochem. 25, 731-737.
- Tian, G., Kang, B.T., Brussaard, L., 1997a. Effect of mulch quality on earthworm activity and nutrient supply in the humid tropics. Soil Biol. Biochem. 29, 369-373.
- Tian, G., Brussaard, L., Kang, B.T., Swift, M.J., 1997b. Soil fauna-mediated decomposition of plant residues under constrained environmetal and resource quality conditions. In: Cadisch, G., Giller, K.E. (Eds.), Driven by Nature: Plant Litter Quality and Decomposition. CAB International, Wallingford, UK, pp. 125-134.
- Tisdall, J.M., Oades, J.M., 1982. Organic matter and water stable aggregates in soils. J. Soil Sci. 33, 141-163.
- van Noordwijk, M., Rahayu, S., Williams, S.E., Hairiah, K., Khasanah, N., Schroth, G., 2004. Crop and tree root-system dynamics. In: van Noordwijk, M. (Ed.), Below-Ground Interactions in Tropical Agroecosys- tems: Concepts and Models with Multiple Plant Components. CABI, Wallingford, pp. 83-107.
- Vanlauwe, B., Aihou, K., Aman, S., Iwuafor, E.N.O., Tossah, B.K., Diels, J., Sanginga, N., Lyasse, O., Merckx, R., Deckers, J., 2001. Maize yield as affected by organic inputs and urea in the West African moist savanna. Agron. J. 93, 1191-1199.
- Verhoef, H.A., Brussaard, L., 1990. Decomposition and nitrogen mineralization in natural and agro-ecosys- tems: the contribution of soil animals. Biogeochem- istry 11, 175-211.
- Villenave, C., Charpentier, F., Lavelle, P., Feller, C., Brussaard, L., Pashanasi, B., Barois, I., Albrecht, A., Patron, J.C., 1999. Effects of earthworms on soil organic matter and nutrient dynamics following earth- worm inoculation in field experimental situations. In: Lavelle, P., Brussaard, L., Hendrix, P. (Eds.), Earth- worm Management In Tropical Agroecosystems. CABI, Wallingford, pp. 173-197.
- Wardle, D.A., Bardgett, R.D., Klironomos, J.N., Seta ¨la ¨, H., van der Putten, W.H., Wall, D.H., 2004. Ecological linkages between aboveground and belowground biota. Science 304, 1629-1633.
- Waters, A.G., Oades, J.M., 1991. Organic matter in water-stable agregates. In: Wilson, W.S. (Ed.), Advances in Soil Organic Matter Research: The Impact on Agriculture and the Environment. The Royal Society of Chemistry, Cambridge, pp. 163-174.
- Young, I.M., Crawford, J.W., 2004. Interactions and self- organization in the soil-microbe complex. Science 304, 1634-1637.
Mirjam Pulleman
Abdoulaye Mando